Experiment summary for ENCSR666QNP
doi:10.17989/ENCSR666QNP
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- TEAD3
- Biosample summary
- Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens TEAD3
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- Chip-Seq on HepG2
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina NextSeq 500
- Controls
Attribution
ENCODE3 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Aliases
- richard-myers:SL151948-SL154038
- Date submitted
- July 29, 2016
- Date released
- November 8, 2016
- Submitter comment
- ENCODE4 pipeline run failed at the chip.call_peak_pooled step.
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
1 | 1 | Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens TEAD3 | ENCBS648OFK | ENCGM116IJY | ENCAB697XQW | ENCLB353UTG |
2 | 1 | Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens TEAD3 | ENCBS806DHA | ENCGM116IJY | ENCAB697XQW | ENCLB205CFU |