Experiment summary for ENCSR658IQB

Summary

Status
released
Assay
eCLIP
Target
SMNDC1
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
eCLIP experiment on K562 against SMNDC1
Nucleic acid type
RNA
Size range
175-300
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
agarose gel extraction
Strand specificity
Strand-specific
Controls

Attribution

ENCODE3 project
Lab
Gene Yeo, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
gene-yeo:445
Date submitted
March 22, 2016
Date released
December 16, 2015
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCORE

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 cell lineENCBS318IMKENCAB616ASEENCLB039AEI
21K562 cell lineENCBS489LOCENCAB616ASEENCLB877GLA