Experiment summary for ENCSR648YEP

doi:10.17989/ENCSR648YEP

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Mus musculus strain B6NCrl liver tissue embryo (12.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
PolyA RNA-Seq from oligo-dT primed Total RNA on embryonic e12.5 day mouse liver
Nucleic acid type
polyadenylated mRNA
RNA integrity number
9.7 [1-1]9.8 [2-1]
Library starting quantity
10ng
Size range
>200
Extraction method
Ambion mirVana
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR884LPM

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
April 19, 2016
Date released
May 3, 2016
Reference Epigenome
ENCSR192PSV 
Organism Development Series
ENCSR895PVL 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissueENCBS236ISKENCLB878ALV
21Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissueENCBS479VPXENCLB673NRF