Experiment summary for ENCSR640BRI
doi:10.17989/ENCSR640BRI
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP600 (unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119)) whole organism dauer genetically modified (insertion) using bombardment targeting C. elegans unc-62
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input ChIP-seq in D4 worms.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3_input
- Date submitted
- April 24, 2017
- Date released
- November 22, 2017
- Submitter comment
- Alignment and signal files were revoked and replaced with new ones on January 24, 2018 because additional reads were added to the analysis.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | Caenorhabditis elegans strain OP600 (unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119)) mixed sex dauer whole organism genetically modified (insertion) using bombardment targeting C. elegans unc-62 | ENCBS703WRR | ENCGM200GFV | ENCLB110EYF |
| 1 | 1 | Caenorhabditis elegans strain OP600 (unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119)) mixed sex dauer whole organism genetically modified (insertion) using bombardment targeting C. elegans unc-62 | ENCBS310PQM | ENCGM200GFV | ENCLB120VBV |