1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HepG2

Experiment summary for ENCSR633OVO

doi:10.17989/ENCSR633OVO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
RFX3
Biosample summary
Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens RFX3
Biosample Type
cell line
Replication type
isogenic
Description
Chip-Seq on HepG2
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE3 project
Lab
Richard Myers, HAIB
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Aliases
richard-myers:SL159324-SL159325
Date submitted
October 28, 2016
Date released
November 8, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens RFX3ENCBS447ONXENCGM448LEQENCAB697XQWENCLB077XDH
21Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens RFX3ENCBS252JAWENCGM448LEQENCAB697XQWENCLB019UPX

Files

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Output type
Replicates

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