Experiment summary for ENCSR623SXW
doi:10.17989/ENCSR623SXW
Summary
- Status
- released
- Assay
- whole-genome shotgun bisulfite sequencing (WGBS)
- Biosample summary
- Homo sapiens urinary bladder tissue male child (3 years)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Nucleic acid type
- DNA
- Extraction method
- QIAGEN DNeasy Blood & Tissue Kit
- Platform
- Illumina HiSeq 2500
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Joe Ecker, Salk
- Award
- U01ES017166 (Bing Ren, UCSD)
- Project
- Roadmap
- External resources
- Aliases
- joe-ecker:BL-1-wgbs, roadmap-epigenomics:Whole Genome Shotgun Bisulfite Sequencing of Bladder Cells from Human STL001_Dec-23-2012_68421, roadmap-epigenomics:Whole Genome Shotgun Bisulfite Sequencing of Bladder Cells from Human STL001_Dec-30-2012_65345
- Date submitted
- July 31, 2013
- Date released
- July 31, 2013
- Submitter comment
- The pipeline processing for this experiment is not currently able to proceed beyond alignment. Full analysis will be pursued again once the ENCODE Uniform Pipeline for WGBS data is updated.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens male child (3 years) urinary bladder tissue | ENCBS372BVG | ENCLB202JVJ |
1 | 2 | Homo sapiens male child (3 years) urinary bladder tissue | ENCBS372BVG | ENCLB150ZBM |