Experiment summary for ENCSR617FWQ
doi:10.17989/ENCSR617FWQ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- nhr-25
- Biosample summary
- Caenorhabditis elegans strain OP33 (unc-119(ed3) III; wgIs33) whole organism L2 larva genetically modified (insertion) using bombardment targeting C. elegans nhr-25
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against eGFP-nhr-25 in L2 larva worms.
- Nucleic acid type
- DNA
- Size range
- 150-350
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3835
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 2 | 1 | Caenorhabditis elegans strain OP33 (unc-119(ed3) III; wgIs33) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans nhr-25 | ENCBS011MMW | ENCGM756IDK | ENCAB435FBQ | ENCLB407UUZ |
| 1 | 1 | Caenorhabditis elegans strain OP33 (unc-119(ed3) III; wgIs33) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans nhr-25 | ENCBS921EMC | ENCGM756IDK | ENCAB435FBQ | ENCLB878GNA |
| 3 | 1 | Caenorhabditis elegans strain OP33 (unc-119(ed3) III; wgIs33) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans nhr-25 | ENCBS120TLG | ENCGM756IDK | ENCAB435FBQ | ENCLB416COX |