1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. A673

Experiment summary for ENCSR611JJS

doi:10.17989/ENCSR611JJS

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A673
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
2.312ng
Size range
300-800 [2-1]200-600 [1-1]
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 894
Date submitted
May 23, 2015
Date released
November 13, 2017
Reference Epigenome
ENCSR985TIQ 
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens A673 cell lineENCBS385OLCENCAB000AXXENCLB352PYX
11Homo sapiens A673 cell lineENCBS615MBVENCAB000AXXENCLB659PZY

Files

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File format
Output type
Replicates

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