Experiment summary for ENCSR609JSK
doi:10.17989/ENCSR609JSK
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Drosophila melanogaster strain Xbp1-GFP whole organism embryo (0-24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster Xbp1
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- Input control for ChIP-seq on transgenic flies expressing Xbp1-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2000
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:Xbp1-GFP-INPUT
- Date submitted
- August 2, 2016
- Date released
- September 29, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Drosophila melanogaster strain Xbp1-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster Xbp1 | ENCBS144YCS | ENCGM154NTT | ENCLB241CTA |