Experiment summary for ENCSR608VNA

doi:10.17989/ENCSR608VNA

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K4me3
Biosample summary
Homo sapiens neural cell originated from H1
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Nucleic acid type
DNA
Size range
300-800 [1-1]300-800 [1-2]200-600 [2-1]
Fragmentation methods
sonication (generic) [1-1]sonication (generic) [1-2]shearing (Covaris generic) [2-1]
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 12
Date submitted
March 19, 2014
Date released
July 11, 2014
Reference Epigenome
ENCSR477LDX 
Submitter comment
As of June 22, 2017, control ENCSR308JFE requires new bams. New files will be processed for its downstream experiments.
Tags
Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens male embryo neural in vitro differentiated cells originated from H1ENCBS504GFWENCAB000AUUENCLB805RMU
12Homo sapiens male embryo neural in vitro differentiated cells originated from H1ENCBS504GFWENCAB000AUUENCLB354PZC
21Homo sapiens male embryo neural in vitro differentiated cells originated from H1ENCBS737HIZENCAB582RSVENCLB922CKK