Experiment summary for ENCSR596YNC

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Drosophila melanogaster VK00033 whole organism adult genetically modified using site-specific recombination
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing Crg-1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:Crg-1-GFP
Date submitted
April 9, 2016
Date released
July 6, 2016
Submitter comment
ENCFF403TPL, ENCFF247STJ were revoked because a software bug accidentally truncated the file content. The submitters have provided replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
31strain Crg-1-GFP mixed sex adult whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Crg-1ENCBS706QTQENCGM581IFOENCAB728YTOENCLB943PHE
21strain Crg-1-GFP mixed sex adult whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Crg-1ENCBS328XZSENCGM581IFOENCAB728YTOENCLB456DIL