Experiment summary for ENCSR578VGI
doi:10.17989/ENCSR578VGI
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP212 (unc-119(ed3) III; ddEx58) whole organism L1 larva genetically modified (insertion) using bombardment targeting C. elegans ceh-82
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input ChIP-seq in L1 larva worms.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3600.3_input
- Date submitted
- April 24, 2017
- Date released
- November 22, 2017
- Submitter comment
- Alignment and signal files were revoked and replaced with new ones on January 24, 2018 because additional reads were added to the analysis.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP212 (unc-119(ed3) III; ddEx58) mixed sex L1 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ceh-82 | ENCBS239YCL | ENCGM949RMV | ENCLB468FTH |
| 2 | 1 | Caenorhabditis elegans strain OP212 (unc-119(ed3) III; ddEx58) mixed sex L1 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ceh-82 | ENCBS939NJX | ENCGM949RMV | ENCLB997GZW |