Experiment summary for ENCSR578QSO

doi:10.17989/ENCSR578QSO

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K4me3
Biosample summary
Homo sapiens endothelial cell of umbilical vein newborn
Biosample Type
primary cell
Replication type
isogenic
Nucleic acid type
DNA
Size range
200-600
Fragmentation methods
shearing (Covaris generic) [1-1]sonication (generic) [2-1]
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 532
Date submitted
April 11, 2016
Date released
November 16, 2016
Reference Epigenome
ENCSR194DQD 
Annotation (physical modeling)
Submitter comment
As of August 2022, the donors associated with the biosamples in this dataset were changed from ENCDO551FXN to ENCDO466MPW and ENCDO560UMK. See PMID:32728101.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ENCYCLOPEDIAv2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens newborn endothelial of umbilical vein primary cellENCBS741UNQENCAB582RSVENCLB305XAQ
21Homo sapiens newborn endothelial of umbilical vein primary cellENCBS859WPHENCAB582RSVENCLB204VWR