Experiment summary for ENCSR576SHT
doi:10.17989/ENCSR576SHT
Summary
- Status
- released
- Assay
- eCLIP
- Target
- DDX42
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eCLIP experiment on K562 against DDX42
- Nucleic acid type
- RNA
- Size range
- 175-300
- Fragmentation methods
- see document
- Size selection method
- agarose gel extraction
- Strand specificity
- Strand-specific
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Gene Yeo, UCSD
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- External resources
- References
- Aliases
- gene-yeo:241
- Date submitted
- March 21, 2016
- Date released
- July 15, 2015
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens K562 cell line | ENCBS638EYY | ENCAB455YJZ | ENCLB791FIV |
1 | 1 | Homo sapiens K562 cell line | ENCBS365DFQ | ENCAB455YJZ | ENCLB458RDI |