Experiment summary for ENCSR564UWC

Summary

Status
released
Assay
ChIP-seq
Target
eGFP-Vsx1
Biosample summary
Drosophila melanogaster VK00033 whole organism embryo (0-18 hours) genetically modified using site-specific recombination
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing Vsx1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:Vsx1-GFP
Date submitted
September 11, 2017
Date released
November 22, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
31strain Vsx1-GFP mixed sex embryo (0-18 hours) whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Vsx1ENCBS676CSLENCGM875HXKENCAB728YTOENCLB324YXC
21strain Vsx1-GFP mixed sex embryo (0-18 hours) whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Vsx1ENCBS109QFTENCGM875HXKENCAB728YTOENCLB999STC