Experiment summary for ENCSR561BQM
doi:10.17989/ENCSR561BQM
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- SIX1
- Biosample summary
- Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SIX1
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ChIP-Seq on HepG2
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina NextSeq 500
- Controls
Attribution
ENCODE4 project
- Lab
- Richard Myers, HAIB
- Award
- UM1HG009411 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Aliases
- richard-myers:SL279982-SL279983
- Date submitted
- July 23, 2018
- Date released
- July 9, 2020
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
2 | 1 | Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SIX1 | ENCBS809IGT | ENCGM653YJJ | ENCAB697XQW | ENCLB539FNH |
1 | 1 | Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SIX1 | ENCBS284JWM | ENCGM653YJJ | ENCAB697XQW | ENCLB149AOM |