Experiment summary for ENCSR545WRA

doi:10.17989/ENCSR545WRA

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue embryo (14.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 14.5 day mouse stomach
Nucleic acid type
DNA
Size range
180-500
Extraction method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E14_5_ST
Date submitted
March 10, 2014
Date released
June 30, 2014
Organism Development Series
ENCSR242GOA 
Reference Epigenome
ENCSR250AOK 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) stomach tissueENCBS564AAAENCLB281YCO
21Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) stomach tissueENCBS568AAAENCLB237QIL
12Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) stomach tissueENCBS564AAAENCLB587XQM
22Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) stomach tissueENCBS568AAAENCLB301HRZ