1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HepG2

Experiment summary for ENCSR545FXC

doi:10.17989/ENCSR545FXC

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ATF7
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
ATF7 ChIP-seq on human HepG2
Nucleic acid type
DNA
Size range
450-650
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-209
Date submitted
July 7, 2016
Date released
July 8, 2016
Annotation (gkmsvm-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens HepG2 cell lineENCBS541YFTENCAB000BMOENCLB541RLZ
21Homo sapiens HepG2 cell lineENCBS225ERFENCAB000BMOENCLB808GIN

Files

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File format
Output type
Replicates

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