Experiment summary for ENCSR544GUO
doi:10.17989/ENCSR544GUO
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- BCL3
- Biosample summary
- Homo sapiens A549
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- BCL3 ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 0 hours.
- Nucleic acid type
- DNA
- Library starting quantity
- 7ng
- Size range
- >200
- Fragmentation methods
- sonication (Bioruptor Twin)
- Size selection method
- dual SPRI
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
Genomics of Gene Regulation Project
- Lab
- Tim Reddy, Duke
- Award
- U01HG007900 (Tim Reddy, Duke)
- Project
- GGR
- External resources
- Aliases
- tim-reddy:BCL3.t00
- Date submitted
- October 19, 2016
- Date released
- October 27, 2016
- Treatment Time Series
- ENCSR022IHB
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens A549 cell line | ENCBS601YNV | ENCAB365DEF | ENCLB324GLA |
| 2 | 1 | Homo sapiens A549 cell line | ENCBS242RJZ | ENCAB365DEF | ENCLB990PGF |
| 3 | 1 | Homo sapiens A549 cell line | ENCBS468UQT | ENCAB365DEF | ENCLB584HHW |