Experiment summary for ENCSR535OAD

doi:10.17989/ENCSR535OAD

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Drosophila melanogaster strain Oregon-R testis tissue male adult 4 days post synchronization at eclosion stage
Biosample Type
tissue
Replication type
isogenic
Description
RNA-seq on ribo-depleted total RNA from testis, post-eclosion + 4 day (adult)
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Extraction method
Trizol
Fragmentation methods
chemical (generic)
Size selection method
SPRI beads
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR130DDI

Attribution

modENCODE Project
Lab
Brenton Graveley, UConn
Award
U54HG006994 (Susan Celniker, LBNL)
Project
modENCODE
Aliases
brenton-graveley:E-BS272-BS273
Date submitted
March 31, 2014
Date released
March 31, 2014

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Drosophila melanogaster strain Oregon-R male adult 4 days post synchronization at eclosion stage testis tissueENCBS663RNXENCLB524IPV
11Drosophila melanogaster strain Oregon-R male adult 4 days post synchronization at eclosion stage testis tissueENCBS275MCOENCLB403GCO