Experiment summary for ENCSR504HOI
doi:10.17989/ENCSR504HOI
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- SRF
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens SRF
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-SRF ChIP-seq on human K562
- Nucleic acid type
- DNA
- Size range
- 250-450 [3-1]450-650 [2-1]
- Fragmentation methods
- sonication (Bioruptor Pico)
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:K562_eGFP-SRF_CRISPR_ChIP
- Date submitted
- July 19, 2017
- Date released
- January 25, 2022
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 3 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SRF | ENCBS939PQT | ENCGM675KII | ENCAB728YTO | ENCLB564IPK |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SRF | ENCBS976URJ | ENCGM675KII | ENCAB728YTO | ENCLB425PXA |