Experiment summary for ENCSR476TKU

doi:10.17989/ENCSR476TKU

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours
Biosample Type
in vitro differentiated cells
Replication type
unreplicated
Description
Ovation Human FFPE RNA-Seq Multiplex System
Treatments
100 ng/mL lipopolysaccharide (CHEBI:16412) for 4 hours
Nucleic acid type
RNA
Size range
100-350
Extraction method
RNeasy Plus Mini Kit Qiagen cat#74134 plus additional on column Dnase treatment
Strand specificity
Strand-specific (forward)

Attribution

Genomics of Gene Regulation Project
Lab
Manuel Garber, UMass
Award
U01HG007910 (Jeremy Luban, UMass)
Project
GGR
External resources
Aliases
manuel-garber:D09_MDDC_Lps_4h_RNA-seq
Date submitted
February 6, 2016
Date released
January 19, 2017

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens dendritic in vitro differentiated cells treated with 100 ng/mL lipopolysaccharide for 4 hoursENCBS737RZUENCLB328MWF