Experiment summary for ENCSR469WPG
doi:10.17989/ENCSR469WPG
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens Caco-2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- Caco-2 for bru-seq comparison
- Nucleic acid type
- RNA
- RNA integrity number
- 9
- Library starting quantity
- 300ng
- Average fragment size
- 249 [1-1]252 [2-1]
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR597UQL
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Barbara Wold, Caltech
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- External resources
- Aliases
- barbara-wold:Caco-2_for_bru-seq_comparison
- Date submitted
- June 14, 2021
- Date released
- February 1, 2022
- Reference Epigenome
- ENCSR838VOB
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens Caco-2 cell line | ENCBS075YII | ENCLB882EHH |
| 2 | 1 | Homo sapiens Caco-2 cell line | ENCBS020DQC | ENCLB321GGE |