Experiment summary for ENCSR466KZY

doi:10.17989/ENCSR466KZY

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Mus musculus C57BL/6 stomach tissue embryo (16.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
PolyA RNA-Seq from oligo-dT primed Total RNA on embryonic 16.5 day mouse stomach
Nucleic acid type
polyadenylated mRNA
RNA integrity number
9.9 [2-1]9.2 [1-1]
Library starting quantity
10ng
Size range
>200
Extraction method
Ambion mirVana
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR884LPM

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
September 24, 2015
Date released
October 13, 2015
Organism Development Series
ENCSR541DZV 
Reference Epigenome
ENCSR827DHS 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21strain B6NCrl mixed sex embryo (16.5 days) stomach tissueENCBS793TEWENCLB732ZDB
11strain B6NCrl mixed sex embryo (16.5 days) stomach tissueENCBS243DCEENCLB852NKM