Experiment summary for ENCSR456ASB

Summary

Status
released
Assay
eCLIP
Target
UPF1
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
eCLIP experiment on K562 against UPF1
Nucleic acid type
RNA
Size range
175-300
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
agarose gel extraction
Strand specificity
Strand-specific
Controls

Attribution

ENCODE3 project
Lab
Gene Yeo, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
gene-yeo:465
Date submitted
March 22, 2016
Date released
April 26, 2016
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCORE

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21K562 cell lineENCBS318IMKENCAB730BOOENCLB022FVI
11K562 cell lineENCBS517UIRENCAB730BOOENCLB235NQC