Experiment summary for ENCSR449SEF

doi:10.17989/ENCSR449SEF

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens transverse colon tissue female adult (51 years)
Biosample Type
tissue
Replication type
isogenic
Nucleic acid type
DNA
Size range
200-600
Fragmentation methods
none [1-2]none [1-1]sonication (generic) [2-2]sonication (generic) [2-1]
Controls

Attribution

ENCODE4 project
Lab
Bradley Bernstein, Broad
Award
UM1HG009390 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 2979
Date submitted
October 31, 2018
Date released
December 14, 2018
Reference Epigenome
ENCSR654ORD 
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Visit collection page for ENTExSearch for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
12Homo sapiens female adult (51 years) transverse colon tissueENCBS555CANENCAB000AXXENCLB277MTN
11Homo sapiens female adult (51 years) transverse colon tissueENCBS555CANENCAB000AXXENCLB821IFF
22Homo sapiens female adult (51 years) transverse colon tissueENCBS515RIZENCAB719MQZENCLB674MYY
21Homo sapiens female adult (51 years) transverse colon tissueENCBS515RIZENCAB719MQZENCLB710CAW