Experiment summary for ENCSR444WHQ

doi:10.17989/ENCSR444WHQ

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens skeletal muscle myoblast
Biosample Type
primary cell
Replication type
isogenic
Description
The libraries contained in this experiment come from independent growths of primary cell line HSMM that has been differentiated into myoblasts. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
shearing (Covaris generic)
Size selection method
other
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
July 31, 2014
Date released
June 30, 2014
Reference Epigenome
ENCSR339JWY 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens skeletal muscle myoblast primary cellENCBS665DRDENCLB550ATC
11Homo sapiens skeletal muscle myoblast primary cellENCBS328AAAENCLB493TSJ