Experiment summary for ENCSR443FOO

doi:10.17989/ENCSR443FOO

Summary

Status
released
Assay
ChIP-seq (Control ChIP-seq)
Control type
input library
Biosample summary
Caenorhabditis elegans strain OP190 (unc-119(ed3) III; wgIs190) whole organism L1 larva (6 hours) at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans pax-3
Biosample Type
whole organisms
Replication type
unreplicated
Description
This is the ChIP-seq control of transgenic worms expressing pax-3-eGFP fusion proteins.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:PAX-3_OP190_L1-INPUT
Date submitted
February 26, 2018
Date released
March 1, 2018

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11Caenorhabditis elegans strain OP190 (unc-119(ed3) III; wgIs190) mixed sex L1 larva (6 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans pax-3ENCBS284CESENCGM590DHQENCLB294SRI