Experiment summary for ENCSR430SAY

doi:10.17989/ENCSR430SAY

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NCrl forebrain tissue embryo (16.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 16.5 day mouse forebrain
Nucleic acid type
DNA
Size range
180-500
Extraction method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E16_5_FB
Date submitted
June 4, 2014
Date released
December 17, 2014
Organism Development Series
ENCSR082AVR 
Reference Epigenome
ENCSR502XBO 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl mixed sex embryo (16.5 days) forebrain tissueENCBS156DHUENCLB690YWZ
21Mus musculus strain B6NCrl mixed sex embryo (16.5 days) forebrain tissueENCBS512LKAENCLB040XST
12Mus musculus strain B6NCrl mixed sex embryo (16.5 days) forebrain tissueENCBS156DHUENCLB326IED
22Mus musculus strain B6NCrl mixed sex embryo (16.5 days) forebrain tissueENCBS512LKAENCLB288CZY