Experiment summary for ENCSR426MPH
doi:10.17989/ENCSR426MPH
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- odd-2
- Biosample summary
- Caenorhabditis elegans strain OP405 (unc-119(tm4063) III; wgIs405) whole organism hermaphrodite late embryo genetically modified (insertion) using bombardment targeting C. elegans odd-2
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq of transgenic worms expressing ODD-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- E-Gel
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:ODD-2-OP405-LE
- Date submitted
- July 30, 2015
- Date released
- November 22, 2017
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 2 | 1 | Caenorhabditis elegans strain OP405 (unc-119(tm4063) III; wgIs405) hermaphrodite late embryo whole organism genetically modified (insertion) using bombardment targeting C. elegans odd-2 | ENCBS770KSY | ENCGM376AYX | ENCAB435FBQ | ENCLB529YZD |
| 1 | 1 | Caenorhabditis elegans strain OP405 (unc-119(tm4063) III; wgIs405) hermaphrodite late embryo whole organism genetically modified (insertion) using bombardment targeting C. elegans odd-2 | ENCBS735PQO | ENCGM376AYX | ENCAB435FBQ | ENCLB102SEE |