Experiment summary for ENCSR414GWO

doi:10.17989/ENCSR414GWO

Summary

Status
released
Assay
small RNA-seq
Biosample summary
Drosophila melanogaster strain Oregon-R S2
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on rRNA-depleted total RNA in Drosophila cell line S2-DRSC, < 200 nucleotides in size that was TAP-treated prior to cloning.
Treatments
Tobacco Acid Pyrophosphatase for 1 hour
Nucleic acid type
RNA
Depleted in
rRNA
Size range
<200
Extraction method
Ambion mirVana
Strand specificity
Strand-specific

Attribution

modENCODE Project
Lab
Thomas Gingeras, CSHL
Award
U01HG004271 (Susan Celniker, LBNL)
Project
modENCODE
Aliases
modencode:3831, susan-celniker:E-BS369-BS581_TAP
Date submitted
March 31, 2014
Date released
March 31, 2014

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Drosophila melanogaster strain Oregon-R S2 cell lineENCBS461THKENCLB285ZUO
21Drosophila melanogaster strain Oregon-R S2 cell lineENCBS623ZGXENCLB148AUE