Experiment summary for ENCSR411OOP

doi:10.17989/ENCSR411OOP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
atf-7
Biosample summary
Caenorhabditis elegans strain OP638 (unc-119(tm4063) III; wgIs638) whole organism young adult at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting celegans atf-7
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing ATF-7-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:ATF-7-OP638-yAd
Date submitted
October 5, 2017
Date released
November 6, 2017

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31strain OP638 (unc-119(tm4063) III; wgIs638) mixed sex young adult at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting celegans atf-7ENCBS241KUPENCGM717MPMENCAB728YTOENCLB519FGH
21strain OP638 (unc-119(tm4063) III; wgIs638) mixed sex young adult at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting celegans atf-7ENCBS864PBBENCGM717MPMENCAB728YTOENCLB086JVB