Experiment summary for ENCSR403SZN

doi:10.17989/ENCSR403SZN

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens transverse colon tissue female adult (51 years)
Biosample Type
tissue
Replication type
unreplicated
Description
The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
RNA integrity number
2.3
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
July 20, 2016
Date released
August 4, 2016
Reference Epigenome
ENCSR654ORD 
Annotation (physical modeling)
Tags
Visit collection page for ENTExSearch for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens female adult (51 years) transverse colon tissueENCBS999VTFENCLB364ORB