Experiment summary for ENCSR402VXN

Summary

Status
released
Assay
ChIP-seq
Target
Control
Biosample summary
Caenorhabditis elegans strain OP707 (unc-119(tm4063) III; wgIs707) whole organism mixed stage (embryo) 2.5 hours post synchronization using egg bleaching genetically modified using bombardment
Biosample Type
whole organisms
Replication type
unreplicated
Description
This is the ChIP-seq control of transgenic worms expressing SPTF-1-eGFP fusion proteins.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
SPRI
Strand specificity
Non-strand-specific

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:SPTF-1-OP707-EM-INPUT
Date submitted
October 5, 2017
Date released
November 22, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11strain OP707 (unc-119(tm4063) III; wgIs707) mixed sex mixed stage (embryo) 2.5 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-sptf-1ENCBS135OVRENCGM921XCTENCLB299XNV