Experiment summary for ENCSR398REC

doi:10.17989/ENCSR398REC

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens activated B cell male adult (22 years) treated with 0.5 μM CpG ODN for 24 hours
Biosample Type
primary cell
Replication type
isogenic
Description
PBMCCD19+ (B cells) activatedCPG ODN2006 24h
Treatments
0.5 μM CpG ODN for 24 hours
Nucleic acid type
RNA
RNA integrity number
9 [1-1]8 [2-1]
Library starting quantity
300ng
Average fragment size
280 [1-1]283 [2-1]
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR597UQL

Attribution

ENCODE4 project
Lab
Barbara Wold, Caltech
Award
UM1HG009443 (Barbara Wold, Caltech)
Project
ENCODE
Date released
July 14, 2022

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens male adult (22 years) activated B primary cell treated with 0.5 μM CpG ODN for 24 hoursENCBS323XPYENCLB511XNC
21Homo sapiens male adult (22 years) activated B primary cell treated with 0.5 μM CpG ODN for 24 hoursENCBS430TYQENCLB415NAG