Experiment summary for ENCSR398REC
doi:10.17989/ENCSR398REC
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens activated B cell male adult (22 years) treated with 0.5 μM CpG ODN for 24 hours
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- PBMCCD19+ (B cells) activatedCPG ODN2006 24h
- Treatments
- 0.5 μM CpG ODN for 24 hours
- Nucleic acid type
- RNA
- RNA integrity number
- 9 [1-1]8 [2-1]
- Library starting quantity
- 300ng
- Average fragment size
- 280 [1-1]283 [2-1]
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR597UQL
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Barbara Wold, Caltech
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- External resources
- Date released
- July 14, 2022
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens male adult (22 years) activated B primary cell treated with 0.5 μM CpG ODN for 24 hours | ENCBS323XPY | ENCLB511XNC |
| 2 | 1 | Homo sapiens male adult (22 years) activated B primary cell treated with 0.5 μM CpG ODN for 24 hours | ENCBS430TYQ | ENCLB415NAG |