Experiment summary for ENCSR370ETJ
doi:10.17989/ENCSR370ETJ
Alternate accession: ENCSR779FWD
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Control type
- control
- Biosample summary
- Drosophila melanogaster strain mCherry_shRNA x da-Gal4 whole organism embryo 0-1.5 hours post synchronization at egg laying stage expressing RNAi targeting mCherry
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Nucleic acid type
- polyadenylated mRNA
- Size range
- 350-600
- Extraction method
- Trizol
- Fragmentation methods
- shearing (Covaris generic)
- Strand specificity
- unstranded
- Platform
- Illumina NextSeq 500
Attribution
modERN project
- Lab
- Susan Celniker, LBNL
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- susan-celniker:bsh_ERR_Xbp1_mCherry_0-1.5
- Date submitted
- March 14, 2019
- Date released
- April 25, 2019
- Submitter comment
- Processed data is currently not available for these experiments, but will be added in the future.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Drosophila melanogaster strain mCherry_shRNA x da-Gal4 embryo 0-1.5 hours post synchronization at egg laying stage whole organism expressing RNAi targeting mCherry | ENCBS096IVR | ENCGM618RBJ | ENCLB825ARE |
| 2 | 1 | Drosophila melanogaster strain mCherry_shRNA x da-Gal4 embryo 0-1.5 hours post synchronization at egg laying stage whole organism expressing RNAi targeting mCherry | ENCBS379TMZ | ENCGM618RBJ | ENCLB691RCB |