Experiment summary for ENCSR360YKV

doi:10.17989/ENCSR360YKV

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
cnc
Biosample summary
Drosophila melanogaster strain cnc-GFP whole organism wandering third instar larva genetically modified (insertion) using site-specific recombination targeting D. melanogaster cnc
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing cnc-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
325-425 [1-1]325-450 [2-1]
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
E-Gel
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:cnc-GFP
Date submitted
July 23, 2015
Date released
July 6, 2016
Submitter comment
ENCFF464MXD, ENCFF582JOJ, ENCFF813VYQ, ENCFF694MEO were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Drosophila melanogaster strain cnc-GFP mixed sex wandering third instar larva whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster cncENCBS899MFXENCGM801GWFENCAB728YTOENCLB704ZJY
21Drosophila melanogaster strain cnc-GFP mixed sex wandering third instar larva whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster cncENCBS976XLBENCGM801GWFENCAB728YTOENCLB121EKW