Experiment summary for ENCSR360XIS
doi:10.17989/ENCSR360XIS
Summary
- Status
- released
- Assay
- DNase-seq
- Biosample summary
- Homo sapiens ecto neural progenitor cell originated from H9
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Platform
- Illumina HiSeq 4000, Illumina NextSeq 500
Attribution
ENCODE3 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG007010 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- References
- Date submitted
- September 1, 2017
- Date released
- February 23, 2018
- Annotation (gkmsvm-model)
- Annotation (ChromBPNet-model)
- Submitter comment
- The two samples within this experiment were previously mis-annotated as 'neural progenitor cells' and were incorporated in ENCSR963ALV. On Feb 23, 2018, this issue was rectified and the data were separated based on distinct biosample term names.
- ENCLB303OLI submitter comment
- This library has sub-optimal fragment distribution and library complexity, and has been replaced or will soon be superseded by a new dataset.
- Tags
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens female embryo (5 days) ecto neural progenitor in vitro differentiated cells originated from H9 | ENCBS752TEN | ENCLB182LEM |
| 1 | 1 | Homo sapiens female embryo (5 days) ecto neural progenitor in vitro differentiated cells originated from H9 | ENCBS946LBI | ENCLB303OLI |