Experiment summary for ENCSR348DYP
doi:10.17989/ENCSR348DYP
Summary
- Status
- released
- Assay
- RAMPAGE
- Biosample summary
- Homo sapiens HT1080
- Biosample Type
- cell line
- Replication type
- unreplicated
- Description
- The libraries contained in this experiment come from independent growths of cell line HT-1080, a connective tissue fibrosarcoma from a 35 year old male. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Size selection method
- other
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- References
- Date submitted
- April 2, 2015
- Date released
- March 16, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens HT1080 cell line | ENCBS512AAA | ENCLB088BPI |