Experiment summary for ENCSR345XQL
doi:10.17989/ENCSR345XQL
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP214 (unc-119(ed3) III; wgIs214) whole organism young adult (72 hours) at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans K12H6.12
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- This is the ChIP-seq control of transgenic worms expressing K12H6.12-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:K12H6.12_OP214_yAd-INPUT
- Date submitted
- February 26, 2018
- Date released
- March 1, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | Caenorhabditis elegans strain OP214 (unc-119(ed3) III; wgIs214) mixed sex young adult (72 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans K12H6.12 | ENCBS122TGC | ENCGM237GLK | ENCLB231NJV |
| 3 | 1 | Caenorhabditis elegans strain OP214 (unc-119(ed3) III; wgIs214) mixed sex young adult (72 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans K12H6.12 | ENCBS537ZEU | ENCGM237GLK | ENCLB956ZJV |