Experiment summary for ENCSR334YHO

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus C57BL/6 olfactory bulb adult (54-61 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on 8 week adult mouse olfactory bulb
Nucleic acid type
DNA
Size range
180-500
Lysis method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
Aliases
joe-ecker:P8w_OB
Date submitted
March 15, 2018
Date released
March 30, 2018

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11strain B6NCrl mixed sex adult (54-61 days) olfactory bulb tissueENCBS363WHQENCLB240OWU
21strain B6NCrl mixed sex adult (54-61 days) olfactory bulb tissueENCBS910QRJENCLB738NJW
22strain B6NCrl mixed sex adult (54-61 days) olfactory bulb tissueENCBS910QRJENCLB334PBJ
12strain B6NCrl mixed sex adult (54-61 days) olfactory bulb tissueENCBS363WHQENCLB247AFU