Experiment summary for ENCSR334ADQ
Summary
- Status
- released
- Assay
- ChIP-seq
- Target
- Control
- Biosample summary
- Caenorhabditis elegans strain OP756 (unc-119(tm4063); wgIs756 [ceh-13::TY1::EGFP::3xFLAG + unc-119(+)]) whole organism early embryo (2 hours) using egg bleaching genetically modified using bombardment
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing CEH-13-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation method
- sonication (Bioruptor generic)
- Size selection method
- SPRI
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- valerie-reinke:CEH-13_OP756_EE_INPUT
- Date submitted
- September 17, 2018
- Date released
- September 19, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | strain OP756 (unc-119(tm4063); wgIs756 [ceh-13::TY1::EGFP::3xFLAG + unc-119(+)]) mixed sex early embryo (2 hours) using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-13 | ENCBS223ROE | ENCGM130FKK | ENCLB277AUS |