Experiment summary for ENCSR332DSH

doi:10.17989/ENCSR332DSH

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CG6792
Biosample summary
Drosophila melanogaster strain CG6792-GFP whole organism prepupa genetically modified (insertion) using site-specific recombination targeting D. melanogaster Plzf
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing Plzf-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:Plzf-GFP
Date submitted
April 10, 2016
Date released
July 6, 2016
Submitter comment
ENCFF612RUT, ENCFF832TXV, ENCFF773VBC, ENCFF676JBJ were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Drosophila melanogaster strain CG6792-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster PlzfENCBS895GGBENCGM780VUIENCAB728YTOENCLB618FUD
31Drosophila melanogaster strain CG6792-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster PlzfENCBS969JPWENCGM780VUIENCAB728YTOENCLB772JYQ
11Drosophila melanogaster strain CG6792-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster PlzfENCBS900JKQENCGM780VUIENCAB728YTOENCLB639WXQ