Experiment summary for ENCSR310NYI

doi:10.17989/ENCSR310NYI

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
FOXA2
Biosample summary
Homo sapiens with nonobstructive coronary artery disease; liver tissue male adult (32 years)
Biosample Type
tissue
Replication type
isogenic
Description
Chip-Seq on FOXA2-human
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE3 project
Lab
Richard Myers, HAIB
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Aliases
richard-myers:SL87913-SL93956
Date submitted
July 7, 2016
Date released
June 30, 2016
Annotation (gkmsvm-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag DREAMSearch for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_0

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens male adult (32 years) with nonobstructive coronary artery disease; liver tissueENCBS046RNAENCAB000AGOENCLB962GKZ
21Homo sapiens male adult (32 years) with nonobstructive coronary artery disease; liver tissueENCBS046RNAENCAB000AGOENCLB584XSP