Experiment summary for ENCSR307WAE
Summary
- Status
- revoked
- Assay
- eCLIP
- Target
- RPS5
- Biosample summary
- Homo sapiens HepG2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eCLIP experiment on HepG2 against RPS5
- Nucleic acid type
- RNA
- Size range
- 175-300
- Fragmentation methods
- see document
- Size selection method
- agarose gel extraction
- Strand specificity
- Strand-specific
- Controls
Attribution
ENCODE3 project
- Lab
- Gene Yeo, UCSD
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- External resources
- Aliases
- gene-yeo:658
- Date submitted
- August 3, 2016
- Date released
- September 21, 2016
- Submitter comment
- As of February 17th, 2018, the lab has chosen to revoke this dataset after follow-up experiments suggested potential antibody cross-reactivity with other RNA binding proteins.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens HepG2 cell line | ENCBS074YUC | ENCAB780TEB | ENCLB595NXK |
| 1 | 1 | Homo sapiens HepG2 cell line | ENCBS621TAB | ENCAB780TEB | ENCLB977IOD |