Experiment summary for ENCSR301SWM

Summary

Status
released
Assay
siRNA knockdown followed by RNA-seq (siRNA RNA-seq)
Target
TCP1
Biosample summary
Homo sapiens K562 genetically modified using RNAi
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on K562 cells treated with siRNA targeting TCP1.
Nucleic acid type
RNA
Size range
>200
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
sherman-weissman:E-K562-TCP1
Date submitted
August 9, 2016
Date released
January 31, 2017
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
21K562 cell line expressing RNAi targeting TCP1ENCBS789DXDENCGM752DVQENCLB632UHW
11K562 cell line expressing RNAi targeting TCP1ENCBS608LIFENCGM752DVQENCLB652MLJ