Experiment summary for ENCSR301AEA
doi:10.17989/ENCSR301AEA
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me1
- Biosample summary
- Homo sapiens bipolar neuron originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 days
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Treatments
- 0.5 μg/mL doxycycline hyclate (CHEBI:34730) for 4 days
- Nucleic acid type
- DNA
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 1458
- Date submitted
- December 11, 2015
- Date released
- May 4, 2016
- Reference Epigenome
- ENCSR954HHV
- Submitter comment
- Files ENCFF865LIH, ENCFF569GMA had incorrectly identified paired_end 1 and 2 metadata respectively. They have been corrected to match its fastq file flowcell signature accordingly.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens male adult (53 years) bipolar neuron in vitro differentiated cells originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 days | ENCBS374AAA | ENCAB000APS | ENCLB050REL |
| 1 | 1 | Homo sapiens male adult (53 years) bipolar neuron in vitro differentiated cells originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 days | ENCBS369AAA | ENCAB000APS | ENCLB624IET |