Experiment summary for ENCSR269IUA

doi:10.17989/ENCSR269IUA

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CEBPB
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours
Biosample Type
cell line
Replication type
isogenic
Description
CEBPB ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 12 hours.
Treatments
100 nM dexamethasone (CHEBI:41879) for 12 hours
Nucleic acid type
DNA
Library starting quantity
7ng
Size range
>200
Fragmentation methods
sonication (Bioruptor Twin)
Size selection method
dual SPRI
Controls

Attribution

Genomics of Gene Regulation Project
Lab
Tim Reddy, Duke
Award
U01HG007900 (Tim Reddy, Duke)
Project
GGR
External resources
Aliases
tim-reddy:CEBPB.t12
Date submitted
October 19, 2016
Date released
October 27, 2016
Treatment Time Series
ENCSR625DZB 
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 12 hoursENCBS636XOHENCAB681ZWHENCLB945JSI
21Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 12 hoursENCBS504CVAENCAB681ZWHENCLB375HEI
31Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 12 hoursENCBS179DJAENCAB681ZWHENCLB792NXW