Experiment summary for ENCSR266NAT

doi:10.17989/ENCSR266NAT

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
elt-2
Biosample summary
Caenorhabditis elegans strain OP56 (unc-119(ed3) III; wgIs56) whole organism hermaphrodite late embryo 4 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans elt-2
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing ELT-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:ELT-2-OP56-LE
Date submitted
May 9, 2016
Date released
September 29, 2016
Submitter comment
ENCFF996OAC, ENCFF468UAO, ENCFF644KPC, ENCFF098DUF were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Caenorhabditis elegans strain OP56 (unc-119(ed3) III; wgIs56) hermaphrodite late embryo 4 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans elt-2ENCBS924LDQENCGM676QSBENCAB728YTOENCLB096ZHX
21Caenorhabditis elegans strain OP56 (unc-119(ed3) III; wgIs56) hermaphrodite late embryo 4 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans elt-2ENCBS702JLFENCGM676QSBENCAB728YTOENCLB230BMB