Experiment summary for ENCSR258DIG
doi:10.17989/ENCSR258DIG
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- unc-55
- Biosample summary
- Caenorhabditis elegans strain NC1639 ([wdIs49 (pttr39::UNC-55a::GFP; dpy-20+) III) whole organism L2 larva genetically modified (insertion) using bombardment targeting C. elegans unc-55
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against eGFP-unc-55 in L2 larva worms.
- Nucleic acid type
- DNA
- Size range
- 150-350
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:4035
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
2 | 1 | Caenorhabditis elegans strain NC1639 ([wdIs49 (pttr39::UNC-55a::GFP; dpy-20+) III) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans unc-55 | ENCBS254XUS | ENCGM807EQR | ENCAB435FBQ | ENCLB301DSB |
1 | 1 | Caenorhabditis elegans strain NC1639 ([wdIs49 (pttr39::UNC-55a::GFP; dpy-20+) III) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans unc-55 | ENCBS212MAP | ENCGM807EQR | ENCAB435FBQ | ENCLB492LYX |
3 | 1 | Caenorhabditis elegans strain NC1639 ([wdIs49 (pttr39::UNC-55a::GFP; dpy-20+) III) mixed sex L2 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans unc-55 | ENCBS087QTY | ENCGM807EQR | ENCAB435FBQ | ENCLB335HIY |